In silico studies of quinazolinone analogues to distinguish their hypothetical binding mode using the X-ray crystal structure human carbon anhydrase II (HCAII) enzyme complex with sugar sulfamate for anticonvulsant activity
Abstract
The quinazolinone moiety is a significant pharmacophore depicts various types of pharmacological activities as shown in recent exhaustive ligatures serve. Quinazolinone exhibit potent central nervous system (CNS) activities like anti-anxiety, analgesic, anti-inflammatory and anticonvulsant. To develop these views and application profiles, attempt have been made to report a drug/ligand or receptor/protein interactions by identifying the suitable active site against X-ray crystal structure of Human Carbonic Anhydrase II (HCA II) enzyme for anticonvulsant activity using Vlife MDS version 4.6 Software because the protein-ligand interaction plays a significant role in structural based drug designing. The interaction was evaluated based on the score comparison between quinazolinone derivatives with sugar sulfamate. The quinazolinone ring forms hydrophobic and hydrogen bond contacts amino acid residues. The ligands 4t and 4s were shown to possess minimum dock score i.e. minimum binding energy in Kcal/mole i.e. these molecules has more affinity for active site of receptor. Clearly, Molecules having low dock score and binding energy shows more affinity towards the receptor. The data reported in this article may be helpful for the medicinal chemists who are working in this area.
Keywords:
Molecular docking, anticonvulsant, Human Carbonic Anhydrase II (HCA II), quinazolinoneDOI
https://doi.org/10.25004/IJPSDR.2023.150516References
Khan A, Khan M, Halim SA, Khan ZA, Shafiq Z, Al-Harrasi A. Quinazolinones as competitive inhibitors of carbonic anhydrase-II (human and bovine): synthesis, in-vitro, in-silico, selectivity, and kinetics studies. Frontiers in Chemistry. 2020 Dec 1; 8:598095.
Abuelizz HA, El Dib R, Marzouk M, Anouar EH, Maklad YA, Attia HN, Al-Salahi R. Molecular docking and anticonvulsant activity of newly synthesized quinazoline derivatives. Molecules. 2017 Jun 30;22(7):1094.
Ciccone L, Cerri C, Nencetti S, Orlandini E. Carbonic anhydrase inhibitors and epilepsy: State of the art and future perspectives. Molecules. 2021 Oct 22;26(21):6380.
Liu T, Peng F, Cao X, Liu F, Wang Q, Liu L, Xue W. Design, synthesis, antibacterial activity, antiviral activity, and mechanism of myricetin derivatives containing a quinazolinone moiety. ACS omega. 2021 Nov 4;6(45):30826-33.
Poorirani S, Sadeghian-Rizi S, Khodarahmi G, Khajouei MR, Hassanzadeh F. Synthesis and cytotoxic evaluation of novel quinazolinone derivatives as potential anticancer agents. Research in Pharmaceutical Sciences. 2018 Oct;13(5):450.
Awwad A. Radwan and Fars K. Alanazi “Biological Activity of quinazolinones”. https://www.intechopen.com/chapters/70910 .
Fröhlich T, Reiter C, Ibrahim MM, Beutel J, Hutterer C, Zeitträger I, Bahsi H, Leidenberger M, Friedrich O, Kappes B, Efferth T. Synthesis of novel hybrids of quinazoline and artemisinin with high activities against Plasmodium falciparum, human cytomegalovirus, and leukemia cells. ACS omega. 2017 Jun 1;2(6):2422-31.
Shalaby AA, El‐Khamry AM, Shiba SA, Ahmed AA, Hanafi AA. Synthesis and antifungal activity of some new quinazoline and benzoxazinone derivatives. Archiv der Pharmazie: An International Journal Pharmaceutical and Medicinal Chemistry. 2000 Nov;333(11):365-72.
Ghodge B, Kshirsagar A, Navghare V. Synthesis, characterization, and investigation of the anti-inflammatory effect of 2, 3-disubstituted quinazoline-4 (1H)-one. Beni-Suef University Journal of Basic and Applied Sciences. 2020 Dec;9(1):1-2.
Cohen E, Klarberg B, Vaughan Jr JR. Quinazolinone sulfonamides. A new class of diuretic Agents1. Journal of the American Chemical Society. 1960 Jun;82(11):2731-5.
Asif M. Chemical characteristics, synthetic methods, and biological potential of quinazoline and quinazolinone derivatives. International journal of medicinal chemistry. 2014;2014.
Rajasekaran S, Rao G, Pai PN. Synthesis, antitubercular, antibacterial and antioxidant activity of some 2-phenyl-3-substituted quinazolin-4 (3H)-ones. Der Pharma Chem. 2010;2(5):153-63.
Cornell WD, Cieplak P, Bayly CI, Gould IR, Merz KM, Ferguson DM, Spellmeyer DC, Fox T, Caldwell JW, Kollman PA. A second generation force field for the simulation of proteins, nucleic acids, and organic molecules J. Am. Chem. Soc. 1995, 117, 5179− 5197. Journal of the American Chemical Society. 1996 Mar 6;118(9):2309-.
Wang R, Lai L, Wang S. Further development and validation of empirical scoring functions for structure-based binding affinity prediction. Journal of computer-aided molecular design. 2002 Jan;16:11-26.
Halgren TA. Merck molecular force field. I. Basis, form, scope, parameterization, and performance of MMFF94. Journal of computational chemistry. 1996 Apr;17(5‐6):490-519.
Klebe G, Mietzner T. A fast and efficient method to generate biologically relevant conformations. Journal of Computer-Aided Molecular Design. 1994 Oct;8:583-606.
Taylor RD, Jewsbury PJ, Essex JW. A review of protein-small molecule docking methods. Journal of computer-aided molecular design. 2002 Mar;16:151-66.
Jain AN. Scoring functions for protein-ligand docking. Current Protein and Peptide Science. 2006 Oct 1;7(5):407-20.
Kaapro A, Ojanen J. Protein docking. URL http://www. lce. hut. fi/teaching/S-114.500/k2002/Protdock. pdf. 2002 Nov 27.
Krovat EM, Steindl T, Langer T. Recent advances in docking and scoring. Current computer-aided drug design. 2005 Jan 1;1(1):93-102.
Kontoyianni M, McClellan LM, Sokol GS. Evaluation of docking performance: comparative data on docking algorithms. Journal of medicinal chemistry. 2004 Jan 29;47(3):558-65.
Protein Data Bank [Internet]. Available from: www.rcsb.org
VLife Sciences Technologies PLP. Vlife MDS 4.6 [Molecular Design Suite] software package VLife Sciences Technologies, Pvt. Ltd. Pune, for 2-D and 3-D QSAR model development and testing.
Published

